Yersinia entomophaga
Entomopathogenic species, studied as a biocontrol agent. Carries the Yen-TC insecticidal toxin complex.
Plasmid content
Copy number is a per-genome measurement, never a species constant.
| Replicon | present | partial | absent | not measured |
|---|---|---|---|---|
chromosome |
0 | 0 | 1 | 0 |
pMT1 |
0 | 0 | 1 | 0 |
pCD1 |
0 | 0 | 1 | 0 |
pPCP1 |
0 | 0 | 1 | 0 |
Defining markers
cgMLST is the reference typing method for the genus (BIGSdb-Pasteur). SNP branch nomenclature applies to Y. pestis alone, which is a monomorphic clone.
| Type | Code | Source |
|---|---|---|
| other | Yen-TC insecticidal toxin complex | Hurst et al. 2011, J Bacteriol; basis of its biocontrol interest |
Typing equivalences
Three cgMLST schemes coexist for the genus and have never been compared in the literature. They are shown side by side; this atlas does not arbitrate between them.
| System | Code | Match |
|---|---|---|
| ncbi | txid935293 | exact |
Genomes (1)
| Accession | Strain | Country | Collection year | Assembly level |
|---|---|---|---|---|
GCF_001656035.1 |
MH96 | New Zealand | 1996 | Chromosome |